Results 31 repositories owned by Pachter Lab

gget

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🧬 gget enables efficient querying of genomic reference databases

kallisto-transcriptome-indices

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Reference transcriptome indices build from kallisto for popular organisms

kallisto_paper_analysis

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Analysis from kallisto paper

kite

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kallisto index tag extractor

kma

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Keep Me Around: Intron Retention Detection

LP_2021

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MBGBLHGP_2019

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Code for reproducing results from the paper "Modular and efficient pre-processing of single-cell RNA-seq data"

MCML

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metakallisto

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Using kallisto for metagenomic analysis

NYMP_2018

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