Oliver Schulz
Oliver Schulz
One important difference is that emcee can work in parallel (we should probably add an emcee-like sampler to BAT) and the many walkers share information about the posterior, so they...
If you can send me your complete notebook (with necessary data files) I can take a look at potential performance issues.
@atasattari is this still an active issue?
> Would it be reasonable to add a similar example to the tutorial? I can provide my code for reference if needed. Thanks you, yes. We we thinking about adding...
Can you check the ``` Base.Meta.ParseError("parsing error in src/samplers/transformed_mcmc/struct_list.jl:34: missing comma or } in argument list") ``` CI error on Julia 1?
I've updated this to use the new BATContext. "transformed_example.jl" doesn't fully run through, but I'm not sure if that's related.
`TransformedAdaptiveMHTuning` in the example works now, but ``` r_hmc = @time BAT.bat_sample_impl(posterior, MCMCSampling(mcalg=HamiltonianMC(), nchains=4, nsteps=4*20000), context) ``` in the example doesn't work yet, but that's to be expected currently, right?...
Ah - well, in any case, I think the adaption to BATContext is complete.
@Micki-D needs to be updated to API changes.
Closing in favor of #441