Oliver Beckstein

Thanks!! > On Nov 5, 2025, at 04:31, Egor Marin ***@***.***> wrote: > > > marinegor > left a comment > (MDAnalysis/mdanalysis#5065) > > @orbeckst sure, I've pushed them on...

Awesome, great work @marinegor !

If you both think that’s feasible then it may still be a positive trade off for us: reduce code burden inside MDA (and magically increase coverage by 0.5%) and do...

Thanks! -- Oliver Beckstein (he/his/him) ***@***.*** > On Jun 12, 2025, at 08:34, Irfan Alibay ***@***.***> wrote: > > > IAlibay > left a comment > (MDAnalysis/mdanalysis#5062) > > Who...

(I assigned the issue to coredevs because anything related to licenses should be done by someone from the core dev team; this is not an issue suitable for e.g. GSOC.)

Can this issue be addressed independently from #4827 ?

Good idea. I hope that the discussion on this issue leads to a feasible and general solution, similar to how the parallelization was refined through discussions. It‘s important for the...

With standard PDB files, the chains are recognized automatically (with MDA 2.9.0): ```python In [1]: !curl https://files.rcsb.org/download/4E43.pdb.gz -O In [2]: u = mda.Universe("./4E43.pdb.gz") In [3]: u.atoms.chainIDs Out[3]: array(['A', 'A', 'A',...

Without further information there's not much more we can do. Please feel free to re-open the issue.

@raulloiscuns it would be great to add your fix to MDAnalysis soon. Are you able to address the review comments?