OpenWorm
OpenWorm
OpenWorm
Repository for the main Dockerfile with the OpenWorm software stack and project-wide issues
CElegansNeuroML
NeuroML based C elegans model, contained in a neuroConstruct project, as well as c302
owmeta
Unified, simple data access python library for data & facts about C. elegans anatomy
c302
The c302 framework for generating multiscale network models of C. elegans
hodgkin_huxley_tutorial
A repository containing code for a number of tutorials on the Hodgkin Huxley model, including an interactive Jupyter notebook
muscle_model
Model of C elegans body wall muscle based on Boyle & Cohen 2008
open-worm-analysis-toolbox
A testing pipeline that allows us to run a behavioural phenotyping of our virtual worm running the same test statistics the Schafer Lab used on their worm data.
openwormbrowser-ios
OpenWorm Browser for iOS, based on the open-3d-viewer, which was based on Google Body Browser