memote
memote copied to clipboard
opencobra
memote – the genome-scale metabolic model test suite
- [ ] Venn diagram of metabolite, reaction and gene overlap.
A model that I just evaluated contains the following information for a given metabolite: ``` ``` This however results 0% chebi / etc.. mapping. What is happening here?
**Just noticed and perhaps most importantly:** ``` memote --version memote, version 0.7.2 ``` And this is a continuation of (as I ran into docker version issue)... https://github.com/opencobra/memote/issues/260 I am working...
This is a future idea: We could double-check that the conversions from a range of different input units to mmol/ gDW are correct. So a user could provide a table...
#### Problem description The history report is an important feature as it constitutes a core workflow of memote. As a user it would be nice to switch back and forth...
#### Problem description In my simple example case `memote history` currently captures the results of both the remote and local master branch. If this is the case for all branches,...
By accepting a model streamed into memote from standard input, memote can make use of the power of unix piping and it would be trivial to use the docker image...
When creating a new model using the template option it is fixed to GitHub. ``` github_username [authorname]: project_name [Memote model repository]: ``` Would it be possible to have a question...