Omar Almolla

Thanks for the reply. To date I have solved the problem by giving ltr digest the output obtained from the EDTA 1.6 version. The above error appeared only when using...

My script: `gt -j 4 ltrdigest -outfileprefix Prunus_avium_ltr -trnas ./INPUT/Hmm_trna/plants-tRNA_cat.fa -hmms ./INPUT/Hmm_trna/hmm_* -seqfile ./INPUT/genomes/Prunus_avium_NCBI/Prunus_avium_NCBI.fna -matchdescstart ./OUTPUTS/EDTA_output/Prunus_avium_NCBI/EDTA_1.9_output/Prunus_avium_NCBI.fna.mod.EDTA.raw/*SORTED.gff3 > Prunus_avium_digest.gff` I could not replicate the same error. Now appear: Segmentation fault (core...

##gff-version 3 ##sequence-region CM024352.1 1 62324707 ##sequence-region CM024353.1 1 46928806 ##sequence-region CM024354.1 1 42862123 ##sequence-region CM024355.1 1 37373756 ##sequence-region CM024356.1 1 41299679 ##sequence-region CM024357.1 1 42624765 ##sequence-region CM024358.1 1 30632009...