Olga Pustovalova issues

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                                            Olga Pustovalova

Update installation instructions for GEOQuery - replace expired URL

Previous installation instructions contained an expired URL: ``` cannot open URL 'https://www.bioconductor.org/biocLite.R': HTTP status was '404 Not Found' ``` I updated the instructions according to the following page: https://www.bioconductor.org/packages/release/bioc/html/GEOquery.html ------...

Fix failing tests: Add compatibility with pandas 2

Closes #84 # Compatibility with pandas 2 ### Problem: For a pandas dataframe that contains both numeric and string columns, the `mean()` function started to fail in pandas 2.0+ because...

Failing test: `test_merge_and_average` fails with a TypeError with pandas 2.0.3

# The test is failing on platforms: - Linux-6.1.85+-x86_64-with-glibc2.35 - Python 3.10.12 - pandas 2.0.3 - numpy 1.25.2 - Windows-11-10.0.22631-SP0 - Python 3.12 - pandas 2.2.2 - numpy 2.0.0 **Update**:...