olechnwin

Results 19 issues of olechnwin

Hi, I'm hoping I can get some answers even though this github looks pretty deserted. I ran the idr using input files that looks like this: ``` track type=narrowPeak name="peaks1.bed"...

I was running idr on rep1 and rep2 and found out some of the output for rep2 do not match the rep2 narrowPeak file. I'm copying one of the offending...

The plot I have in the Rmd file is showing in Rstudio as inline output: ![image](https://github.com/rstudio/rmarkdown/assets/20069067/39bc3a32-114e-420e-991d-8395f3eb2509) But when I clicked on the preview button, the plot is missing. ![image](https://github.com/rstudio/rmarkdown/assets/20069067/7ba69852-dbc9-427a-a0cc-61925621d35d) Unfortunately,...

reprex

Hi, Would it be possible to get an output that is similar to blastp default output? I am running another program that parses the blastp default output to get top...

Hi, I am trying to use the same button to choose multiple files that are in different directories. I was able to return the paths chosen when the button is...

This is a screenshot of my gappedPeak file in IGV. ![image](https://github.com/LiuLabUB/HMMRATAC/assets/20069067/ff7938de-cf28-4277-a818-883771453626) I'm guessing the blue bar is my open chromatin region while the extended line is my nucleosome? I understand...

General Question

I'm still confused about what to do after running the pipeline. I've ran FALCON-unzip pipeline which including quiver to call high quality consensus. I got the cns_output/cns_p_ctg.fastq and cns_h_ctg.fastq. My...

Hi, I am running scaff10x using the following command: ``` /opt/Scaff10X/src/scaff10x \ -nodes 30 \ -data input.dat \ scaffolds_FINAL.fasta scaffolds_FINAL_scaff10x.fasta" ``` Started running on August 31st and the last output...

Hi, First of all, thank you for making such a useful package for shiny app! Is there a resizeable function for Modal Dialog? I tried the `jqui_resizeable` but it didn't...