HMMRATAC icon indicating copy to clipboard operation
HMMRATAC copied to clipboard

Q: gappedPeak file visualization in IGV and interpretation

Open olechnwin opened this issue 2 years ago • 0 comments

This is a screenshot of my gappedPeak file in IGV.

image

I'm guessing the blue bar is my open chromatin region while the extended line is my nucleosome? I understand having an open region flanked by nucleosome at both sides. But with this one, why would you have nucleosome, open chromatin, nucleosomes, open region and another nucleosome?

olechnwin avatar Aug 22 '23 21:08 olechnwin