Oscar Esteban
Oscar Esteban
I see. The fastest way to work around installation issues is using containers. Do you know whether your cluster has Singularity installed or the admins will be willing to install...
(BTW, FSL 6 will not work for sure - if you want to keep trying the manually prepared environment then you'll need FSL 5)
Sure, do not hesitate to redirect your cluster admins to us in case they have any doubts but installing Singularity is generally pretty effective as regards installation problems.
> Do we have examples where this isn't followed and has caused problems? Or is this a guideline that rule crafters should ensure remains the easiest behavior for users? If...
> I think BIDS is not there (yet) in terms of rules for "conversion" (what subject label to choose if there is no subject ID in dicom? what session label...
Isn't a fundamental principle of replicability that given the same dataset, the same method should give you the same output no matter the platform you run it in or the...
> Would you call those virtually identical? No - but there are two different concepts conflated. If participants came on 2 different days, then this principle would open the door...
We may need both. 1) would be a cleaner solution to the problem stated above 2) would be necessary for a file having only b0s, where you have a shape...
Please note that this would still not cover the case of a b=0 with just one volume. We could require `_dwi` to be 4D always in the spec and dimension...
I think this should work in nipype 1.0 without much trouble. Therefore, I see under 1.0 anything that makes the jump between 1.0 and 2.0 easier but does not mean...