Oscar Esteban

Results 335 comments of Oscar Esteban

I'll first dig up #3456 because this one will have little effect if the baseline process is huge already.

> Yeah, STC is done separately, but should be deterministic. I don't think there's any fundamental reason that STC couldn't be included as part of the X5 chain, but transforms...

We might be able to get away delaying loading from nipype in MRIQC, except to create the executor plugin. `from nipype.pipeline.plugins.multiproc import MultiProcPlugin` adds the 4.7GB too. I'm going to...

Okay, yes, this is coming from importing numpy: https://github.com/numpy/numpy/issues/10455#issuecomment-360304921 Indeed, if I import numpy on standard settings of my computer, it adds almost all of those 4.7GB I'm seeing. When...

But we can set ``export OMP_NUM_THREADS=1`` for the mother process and set it to the adequate number elsewhere if needed.

> I guess I misread that you wanted to delay importing numpy until after the workflow was constructed, which doesn't seem possible. Correct, but in theory, *jailing* workflow instantiation as...

Looks like OpenBLAS - should I consider MKL? ``` python -c 'import numpy; numpy.show_config()' blas_info: libraries = ['cblas', 'blas', 'cblas', 'blas'] library_dirs = ['/home/oesteban/.miniconda/lib'] include_dirs = ['/home/oesteban/.miniconda/include'] language = c...

Yup, the question is whether the reportlet is going to be preloaded or the download skipped until details is unfolded. On Tue, Jul 27, 2021, 14:39 Chris Markiewicz ***@***.***> wrote:...