Obin Sturm

> Automatic visualization of the chemical mechanism with graphviz. I was inspired by this idea so here's a step towards graphviz compatibility: https://github.com/obin1/KPP-fixStoichiom/commit/37ef030f67f8e58e67e22ce0a484fca5cf8fde41. This addition creates a DOT language file...

Thanks for binning these topics @RolfSander, I took a while to gather some thoughts, here they are 1. Graph type I agree there are uses for both bipartite and unipartite...

To follow up on these: 1) That sounds good, visualization is more intuitive (and potentially less messy) as a unipartite graph, which can be generated from the bipartite graph. 2)...

Hi @RolfSander, we were actually just looking at this last week! Looks like a really useful tool, especially the interactive visualization. Our projects are still using bipartite graphs, either in...

Great, I started a new branch! I was working in one of the flux/family branches, but will move the code to the new branch to isolate the graph generation.

Here's a visualization from a project @msl3v and I've been working on: giving prod/loss species arbitrarily large absolute tolerances of 1e25 (effectively removing them from the error norm) reduces the...

Not the most elegant fix for KPP in general but the quickest fix for GEOS-Chem regarding [this issue ](https://github.com/geoschem/geos-chem/issues/1753)could be in the scope of `GeosCore/fullchem_mod.F90`, e.g. this commit from December...

Moving to this issue regarding a potential fix specific to GEOS-Chem, Bob suggested on the KPP repository: > Another suggestion is to add entries for ATOL to the GEOS-Chem species_database.yml...