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obi-ontology
The Ontology for Biomedical Investigations
Hello, Question about 'RNA sequencing assay' (OBI:0001177) and 'RNA-seq assay' (OBI:0001271). In OBI, 'RNA-seq assay' is a subclass of 'RNA sequencing assay'. Are there examples of assays that fall under...
Discussed with Jennifer on May 9, 2011 specimen call and with Chris after the call. specimen role: a role borne by a material entity that is gained during a specimen...
I noticed this when looking into #1475. These two classes are being inferred as equivalent: - ['lower respiratory tract specimen'](http://purl.obolibrary.org/obo/OBI_0002783) - ['lower respiratory tract aspirate specimen'](http://purl.obolibrary.org/obo/OBI_0002781) Both are defined as...
Resolves #1477, but this will fail until #1475 and #1476 are resolved.
Does OBI want to take on lists of sequencing assembly software? If so, I can create NTRS for Unicycler, Shovil, Velvet, Canu, Spades. Its possible a "software template" could be...
I'd like to submit "remote patient assessment" or "telehealth patient assessment" as a subclass of “performing a clinical assessment” http://purl.obolibrary.org/obo/OBI_0600003. This term would refer to a clinical assessment performed remotely...
From template WIP: https://docs.google.com/spreadsheets/d/1jDC-IbrBk_o1xxU8Z498ddI-P5HnGfB-Tms7PXDNWTw/edit#gid=0
issue: https://github.com/obi-ontology/obi/issues/1436
1. Create an `obi_base.owl` product (see https://github.com/ontodev/robot/pull/570) \* 2. Retrieve BFO classes, RO core, and IAO metadata 3. Merge these together and run HermiT reasoner 4. If reasoning fails, dump...
just added the class, so that others can start adding subclasses
