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o2r-project
Package an R workspace and all dependencies as a Docker container
Hello :) I was trying to replicate the exact Dockerfile from a folder, but had to override the COPY line as there was no option to add a custom one...
The `trestletech/plumber` image also sets an `ENTRYPOINT`, which breaks detection of installed packages: ```R > containerit::get_installed_packages("trestletech/plumber") Detected API version '1.40' is above max version '1.39'; downgrading INFO [2019-11-12 12:29:31] Running...
I am trying set up a container based on a script and then have that script run on start-up using the CMD_RScript command. I can build the container, but when...
Instead of our own R > Dockerfile-string conversion, use the `dockerfiler`package: https://github.com/ColinFay/dockerfiler - create a PR to `dockerfiler` to not use deprecated `MAINTAINER` but create a label? - ..
MRAN supports file style locations now: https://github.com/RevolutionAnalytics/checkpoint/pull/218 Also, this issue https://github.com/RevolutionAnalytics/checkpoint/issues/216#issuecomment-279167390 reports on how to make checkpoint work for an R Markdown document.
I got this error message when generating from a script that produced the start of the Dockerfile below: ``` FROM trestletech/plumber LABEL maintainer="IIH-Nordic" RUN export DEBIAN_FRONTEND=noninteractive; apt-get -y update \...
Stevedore does not work on appveyor, so the vignettes and some tests do not work: ``` Rscript -e "stevedore::docker_available(); stevedore::docker_client()$api_version()" [1] FALSE Error in py_module_import(module, convert = convert) : ImportError:...
See how xml2 is doing it!
Reproducible example below. Proposal: `dockerfile(repo = "https://cloud.r-project.org", ...)`, and then insert `repo` into `RUN ["install2.r", repo, "randomForest"]`. ``` # this fails Dockerfile: FROM trestletech/plumber LABEL maintainer="leungi" RUN ["install2.r", "randomForest"] ```...
As becomes clear in the [discussion on geospatial libraries in Rocker](https://github.com/rocker-org/rocker/issues/213), the versions of linked external libraries matter. _Can we support packaging explicit version of linked libraries?_ ```R > extSoftVersion()...
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Package an R workspace and all dependencies as a Docker container