nuin

I think this project is indeed dead. It's publish and kill it effect.

I was able to build on macOS using `nimble`, the only issue is that I see ``` [mosdepth] WARNING: built in debug mode; will be slow ``` and it would...

I have `Nim Compiler Version 1.2.4 [MacOSX: amd64]` and `nimble v0.11.4 compiled at 2020-06-28 06:12:35`

@brentp I did the `nimble install` and it still gave me a debug version. I will try the direct nim compilation

It works fine too with an incredible speedup Using debug version `mosdepth -t 16 --by /opt/BED/Inherited_Cancer_panel_FINAL.bed test 138.59s user 2.85s system 110% cpu 2:07.53 total` Using release `~/src/mosdepth/mosdepth -t 16...

Just did a fresh install of Conda on my machine and set the Bioconda channel, got this ``` ❯ conda install mosdepth Collecting package metadata (current_repodata.json): done Solving environment: failed...

PCRE is still listed on the Readme.md on the main page `mosdepth also requires a recent version of PCRE, and will give the error could not import: pcre_free_study if the...

@brentp Just saw this issue, coming from a sliver issue, and yes, I do lots of genomic processing in Macs.

I think this solves most of our issues. The main problem for us is that some old templates are owned by people that don’t admin the site anymore. Having a...