Ngoc Kim Ngan Tran
Ngoc Kim Ngan Tran
I tried to replicate the issue, and it doesn't happen locally. However, when I tested on the `beta` website version, I can replicate that. My hypothesis is event handlers being...
Add documents to the [Wiki](https://github.com/dondi/GRNsight/wiki/Database-Migration-From-YeastMine-to-AllianceMine). I wanted to take a break from it last week, so I didn't investigate PPI. I will do it this week.
I got response from SGD support about the API or service they have. I will test look at it and see if it works. Update: Good news! There is a...
I updated the [Wiki](https://github.com/dondi/GRNsight/wiki/Database-Migration-From-YeastMine-to-AllianceMine) with all analyses for GRN and PPI and the proposed solutions for each.
The ERT1 issue should be fixed now. The issue was that when we updated the database, we forgot to update the database's GRN gene table.
@kdahlquist https://www.alliancegenome.org/bluegenes/alliancemine/templates. Currently AllianceMine has some templates for Yeastmine. Could you please check over them?
I will take a look at these. Thank you!
@kdahlquist for GRN network table, does the regulators and target genes also have "ORF" feature type?
## ORF I modified the query to filter only the ORF feature type, which now returns 28,364 interactions compared to the original query, which returned 29,510 interactions. Could you please...
My current implementation already filter out the duplicate interactions. So it doesn't care what annoted type is currently. Do you want to save duplicate interactions or is there a priority...