Konstantinos Ntatsis
Konstantinos Ntatsis
After installing itk 5.3rc4 in a fresh anaconda environment, we get an error when loading ITKCommonPython (e.g. by calling itk.Vector). However, creating an environment with a standalone install of python...
This PR provides the cosmetic changes needed for PR https://github.com/SuperElastix/elastix/pull/243 together with a small addition. Hence, full credits should be given to @squll1peter for writing up the original PR and...
* Feel free to open any issue related to **elastix-napari plugin** in the current repository (https://github.com/SuperElastix/elastix-napari/issues) * For questions related to the **elastix backend**, **general registration questions** or **announcements**, see:...
Possible future features that could improve or add functionality to the elastix-napari plugin. Feel free share your opinion or any other feature ideas below! - [ ] Visualize fixed and...
Updates `ITK_Example14_WorldCoordinatesExplanation_Napari.ipynb` to address #201. I also removed the qt version pins because they were forcing a very old napari version to be installed. When I test the notebook with...
Useful links: - Issues related to itk-elastix (python wrapping) --> [current repository](https://github.com/InsightSoftwareConsortium/ITKElastix/issues) - Issues related to the elastix backend --> [elastix issues](https://github.com/SuperElastix/elastix/issues) - Questions related to itk-elastix --> [ITK Discourse](https://discourse.itk.org/)...
It seems that `itk.elastix_registration_method` doesn't deduce image types correctly when keyword arguments are used for the images instead of just arguments. See minimal example: ``` import itk import numpy as...
To be updated when: - https://github.com/Project-MONAI/MONAI/pull/5897 is merged into MONAI (original PR here: https://github.com/InsightSoftwareConsortium/itk-torch-transform-bridge/pull/8) - Elastix supports SetInitialTransform(itk_transform) for DenseDisplacementField Related to https://github.com/InsightSoftwareConsortium/ITKElastix/issues/126
Includes an example of Elastix-MONAI affine bridge that was removed from https://github.com/InsightSoftwareConsortium/itk-torch-transform-bridge/pull/6. It will be updated/repurposed when https://github.com/Project-MONAI/MONAI/pull/5897 is merged into MONAI. Also related to: #126