ntadimeti

Results 9 comments of ntadimeti

Add evaluation script for quality enhancement use case

@avantikalal is this still relevant ?

WIP: Update versions of all dependencies

Addresses #223

WIP: Enable reading config files output by atacworks

Addresses #199

Atacworks stuck at "waiting for writter to finish..."

Hi @rochevin thanks for your interest in the tool. Can you please run the default tutorial for atacworks denoise : https://clara-parabricks.github.io/AtacWorks/tutorials/tutorial2.html this will help us understand if the problem is...

Fix to include ends of chromosomes.

@avantikalal where is the chromosome length defined ? and how do we know the full length of the chromosome to know how many zeroes to append ?

Fix to include ends of chromosomes.

De-prioritizing this for v0.3.0

enable automated docker image upload with new merges to master

De-prioritizing this for v0.3.0

Update metrics to support both numpy and torch tensor inputs

@tijyojwad Is this still relevant? could you comment on what/how this PR is going to help with? Also, relevant files that need to be looked at for this change, if...

Update metrics to support both numpy and torch tensor inputs

Gotcha! Makes sense.