Nick Steinmetz

If you can make a small dataset that reproduces the problem and post a dropbox link to it, then I can try to take a look. I'm not sure I...

Hi Eduardo, Sounds like you are approaching the problem in the correct way. The most likely problem is that you have constructed the dat file incorrectly, or specified parameters of...

If you do try this, I'd be really happy to know how it goes - the question is whether all of those doubled-spikes really do get assigned to both of...

could construct a distance metric between each pair of channels based on how many templates are observed on both of those two channels (and how similar the templates appear on...

Suggestion for a quick workaround: put a second row in your data file full of zeros (or maybe random values would be less likely to provoke further crashes) and call...

Hi, I think it is most likely that the data are not being loaded properly into kilosort, perhaps because ops.NchanTOT does not match the number of rows that are really...

Include a new vector in your channel map called "connected" (if it does not already have this) of the same length as chanMap, xcoords, and ycoords. Set connected=true for channels...

You should update ops.NChan to be sum(connected) but keep ops.NchanTOT as whatever you had it before. Otherwise I'm not sure what's the source of the error and you may have...

I think you have set NChanTOT incorrectly. Try downloading neuroscope (here: http://neurosuite.sourceforge.net/) and try different numbers of channels until you get it to open properly and show you traces that...

If you used the provided utility to convert your open ephys file, then the value that you used for ops.NChan there should be the value that you subsequently use for...