Natasha Pavlovikj

Thank you!

@KatharinaHoff , I needed a bioconda recipe for "_braker2_", so I created one, https://anaconda.org/bioconda/braker2. You can see the full recipe here, https://github.com/bioconda/bioconda-recipes/tree/b8e30dd6e2fd9c8d44fb5f56e44cc528e5f46859/recipes/braker2. All the dependencies are listed in "_meta.yaml_". This...

@tommathers , many thanks for the feedback, I really appreciate it! Regarding the "utrrnaseq" binary, looks like the Makefiles for "utrrnaseq" and "compileSpliceCands" were not copying these two binaries to...

@tommathers , I actually had some time tonight, so I updated both "augustus" and "braker2" recipes in bioconda. Please update your "braker2" conda version (should be braker2=2.1.2=2), and let me...

@gusevfe , you shouldn't be having this issue... I just tried installing "braker2" in a new environment and everything worked fine. This error happens when "helpMod.pm" is not in the...

@gusevfe , I am sorry, but I can not replicate your error - "_braker2_" works just fine for me. Please make sure that the used "_perl_" is in the same...

@jolespin , `braker2` is python=3 based, and `funannotate` is python=2, and thus the error you got. Since you can not have both packages in one environment, it will be best...

Thanks @KatharinaHoff ! The BiocondaBot should pick up the new release soon, and I will check the dependencies when that happens.

Hi @KatharinaHoff , The bioconda recipe has been updated to the newest release of BRAKER2. However, I was not able to add ProtHint as a dependency. The license of ProtHint...

@fabio-t , I am so sorry for the late reply! `bioconda` is an open, volunteer-based organization and anyone can contribute to new and already existing recipes. Although I created the...