Isaac Turner

It might be easier to 'map' a contig onto a GFA graph, since contigs should match unitigs perfectly. It just needs a hash of first & last kmers of each...

Hi @yannickwurm, Yes this should be possible. Such information would be most useful when you already have a long contig and you are extending it. You'd need to assemble for...

I've added the missing file on the master branch -- could you try now?

I've added the missing `citycrc.h` file and created a new release -- please let me know if this resolves your issues.

I'll update the docs when I get a chance, in the mean time I hope I can answer some of your questions briefly: `.:.:.:.` are sites that could not be...

:+1:

This would be a useful feature.

I think that `-` should be a `/` ``` -#define kreallocarray(P,N,Z) ((SIZE_MAX - N < Z) ? NULL : krealloc(P, (N*Z))) +#define kreallocarray(P,N,Z) ((SIZE_MAX / N < Z) ? NULL...

I have no idea about LuaJIT bindings, but you can use a fixed size array as a key with `khash` if you wrap it in a struct. This example should...

Ah yes, my bad! Sorry. Can you spot the error: ``` static inline int my_keys_eq(MyKey k1, MyKey k2) { return memcmp(k1.d, k2.d, sizeof(k1.d)); } ``` should be: ``` static inline...