Nick Schurch
Nick Schurch
OK, so this finally core dumped on me over the weekend: ``` *** glibc detected *** more: double free or corruption (!prev): 0x0000000001f1cef0 *** ======= Backtrace: ========= /lib64/libc.so.6[0x30a6275dee] /lib64/libc.so.6[0x30a6278c80] /lib64/libc.so.6(fclose+0x14d)[0x30a626633d]...
This is RNA data, there are no reads anywhere near 100kb. I tried it on the first batch 6148 reads from this run (because minKNOW does that) as a test...
The progress shown completes in a few minutes, then the process stops logging output and crashes. I hesitte to say it hangs exactly - its registered as running according to...
- numpy=1.14.3=py36h14a74c5_0 - numpy-base=1.14.3=py36hdbf6ddf_0 installed from conda
So I tried this again in a completely fresh conda env with the small ~6k DRS reads dataset and I'm still getting the same problem two reads short of the...
I ran the command on the login node of the cluster (::looks nervously around for angry sysadmins::) and got the same error: ``` (tombo) bash-4.1$ tombo resquiggle /cluster/gjb_lab/cdr/ON_MinION_datastore/20170725_1532_fpa8_sample3_2222/fast5 /cluster/gjb_lab/nschurch/Projects/Arabidopsis_annotations/Araport/v11/201606/Araport11_genes.201606.cdna.fasta --processes...
hmmm, I can't see any zombie processes on out cluster management system that might be causing the error but who knows. The downgrade to 1.2.1.2 (via pip) in a new...
I have the same problem using the standard amazonVOD interface - no episodes being shown. Enabling webAPI does not solve the issues. The relevant error from the logs appears to...
Yeah, Make the whole panel at the bottom resizable. I'm not a fan of pop-outs, but having an option to detatcht he panel completely might be nice too - that...
This isn't fixed in the latest stable build (5.225.0.0) so not sure why it's marked closed. 