Nick Waters
Nick Waters
@ChristopherHX ah nice, that fixed it for me!
I like the comment approach, simpler to keep everything in a single file. With the amount of complexity that act/github-actions can handle this makes development much easier for me.
Hi @benjjneb and @elpape , we have had similar questions about setting some sample exclusion criteria. You said that you usually exclude poor quality samples after denoising. I am worried...
This old thread mentioned that you wanted well over 10% (https://github.com/benjjneb/dada2/issues/232#issuecomment-296188769), but that was a while ago, so I'm curious if your intuition has changed or of you've settled on...
Thanks so much @benjjneb ; we are trying to find a lower bound for that. I get that its a study-specific question without easy answers, but I'm trying to come...
Thanks so much the insight @elpape! That is reassuring. And thank you @benjjneb, this is super helpful. We are putting together a big batch for re-sequencing, so I might post...
Hi @raphenya, is it possible there are issues when running jobs on an HPC? When running RGI locally it seems to utilize the requested number of cores, but when running...
can confirm this as well; I rebuilt the docker image using https://github.com/xiaoli-dong/metaerg/pull/38 and it worked as intended
I use both the linter and the the formatter, and I haven't seen it warn about this.
Hi, sorry to revive an old issue, but just to clarify, did the plasmids end up in either of the MiniKraken databases?