Nils Homer

0-2. check [the list of tools in `fgbio`](http://fulcrumgenomics.github.io/fgbio/tools/latest/) to see if there are any tools that can do this for you. For a custom `Scala` implementation, you could take a...

How to test: 1. Run a pipeline ``` java -Xmx8G -jar dagr-0.2.0-SNAPSHOT.jar --report report.txt --experimental-execution SleepyPipeline -j -n 3 -s 42 ``` 2. Ensure that the only dependency is Task...

@tfenne I am very close to having replay supported in the "old" execsystem, but I am running out of time for today!

No tests for replay but it works in my hands for **both** execution systems!

@tfenne I now have test coverage across all the code I want. I was thinking we could do a multi-stage review if you are up for it? I see three...

@clintval I think making `pickResources` `final` in `FixedResources` solves them both. What do you think?

I'm ok with breaking things to correct things, what do you think @tfenne ?

@tfenne I think the solution we can agree upon is making `flag` a `Char`. Honestly, it's a breaking change, but it is the right change. I am very much for...

This could affect a few users, so I'd like to know the motivation.

Sorry if my question wasn't clear, I haven't taken the time to look closely, but is there 2.13, 2.14, or other releases we will need to support too? My first...