nguyenv
nguyenv
Will need to look at issues with building wheels with macOS 11.0 upgrade: > `ERROR: tiledb-0.1.dev1-cpxx-cpxx-macosx_11_0_x86_64.whl is not a supported wheel on this platform`
Microsoft has just announced that deprecation of 10.15 is being pushed to December 1st: https://github.com/actions/runner-images/issues/5583#issuecomment-1219501124. We should still make sure that this gets updated sooner rather than later.
We now build wheels on macOS 11 as of https://github.com/TileDB-Inc/TileDB-Py/pull/1300. However, we still need to migrate CI to macOS 11. The culprit lines are: https://github.com/TileDB-Inc/TileDB-Py/blob/dev/.github/workflows/ci.yml#L58-L65 More specifically 'pip install' seems...
https://github.com/TileDB-Inc/TileDB-Py/actions/runs/3054432721/jobs/4926319975#step:6:48 https://github.com/actions/runner-images/issues/2187 https://github.com/actions/setup-python/issues/279 https://github.com/pypa/pip/issues/10670 Wheels built on Microsoft's macOS-11 runners are not actually compatible with itself seemingly due to Intel vs M1 usage and the fact Microsoft does not yet...
https://github.com/TileDB-Inc/TileDB-Py/runs/7848372619?check_suite_focus=true
https://dev.azure.com/TileDB-Inc/CI/_build/results?buildId=26098&view=logs&jobId=35cef1e0-4eee-51ec-0f39-f0ea4bef66f4&j=35cef1e0-4eee-51ec-0f39-f0ea4bef66f4&t=72073061-58b7-574e-3733-fc43fc034d6c
Hi @royassis, I would drop the rows containing the 0 values: ``` import tiledb import numpy as np import pandas as pd # dataframe with a lot of zero values...
I think I understand now. `tiledb.from_pandas` does recognize Pandas nullable dtypes (note the `pd.UInt8Dtype()`) and will accordingly set the TileDB attribute to be nullable (note the resulting schema). You can...
`test_numpy_bytes` seems to be failing on macos-10.15 at an abnormally large frequency the last few days.
https://github.com/TileDB-Inc/TileDB-Py/runs/7216306493?check_suite_focus=true https://github.com/TileDB-Inc/TileDB-Py/runs/7216304512?check_suite_focus=true