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Organize into subworkflows

Open alyssa-ab opened this issue 2 years ago • 1 comments

Closes #58

alyssa-ab avatar Mar 28 '23 20:03 alyssa-ab

nf-core lint overall result: Failed :x:

Posted for pipeline commit c4603b5

+| ✅ 157 tests passed       |+
!| ❗   5 tests had warnings |!
-| ❌   4 tests failed       |-

:x: Test failures:

:heavy_exclamation_mark: Test warnings:

  • pipeline_todos - TODO string in README.md: Add full-sized test dataset and amend the paragraph below if applicable
  • pipeline_todos - TODO string in methods_description_template.yml: #Update the HTML below to your preferred methods description, e.g. add publication citation for this pipeline
  • pipeline_todos - TODO string in awsfulltest.yml: You can customise AWS full pipeline tests as required
  • pipeline_todos - TODO string in test_full.config: Specify the paths to your full test data ( on nf-core/test-datasets or directly in repositories, e.g. SRA)
  • pipeline_todos - TODO string in test_full.config: Give any required params for the test so that command line flags are not needed

:white_check_mark: Tests passed:

Run details

  • nf-core/tools version 2.11
  • Run at 2023-12-20 00:54:27

github-actions[bot] avatar Mar 28 '23 20:03 github-actions[bot]