cellrangerarc test failing - null path?

[davhum]

Description of the bug

I am having trouble getting the following test to work. Any clues to what I am doing wrong.

The command I ran was:

nextflow run nf-core/scrnaseq -profile test,docker --outdir /mnt/bdsf/test_arc --aligner cellrangerarc

Output error (do you need more info?)

Pipeline completed with errors- ERROR ~ Error executing process > 'NFCORE_SCRNASEQ:SCRNASEQ:FASTQC_CHECK:FASTQC (2)'

Caused by: Path value cannot be null

Workflow: nf-core/scrnaseq: v2.7.1-g4171377 Nextflow: 24.04.4

Command used and terminal output

No response

Relevant files

No response

System information

No response

[j-andrews7]

Also hitting this with the same versions and real data.

[grst]

Cellrangerarc is currently not properly tested, see #290.

[matbonfanti]

This has now been fixed by #441, I am closing the issue!