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Published 20 hours ago • verified publisher icon nf-core

Bump version

Open grst opened this issue 1 year ago • 3 comments

PR checklist

  • [ ] This comment contains a description of changes (with reason).
  • [ ] If you've fixed a bug or added code that should be tested, add tests!
  • [ ] If you've added a new tool - have you followed the pipeline conventions in the contribution docs
  • [ ] If necessary, also make a PR on the nf-core/scrnaseq branch on the nf-core/test-datasets repository.
  • [ ] Make sure your code lints (nf-core lint).
  • [ ] Ensure the test suite passes (nf-test test main.nf.test -profile test,docker).
  • [ ] Check for unexpected warnings in debug mode (nextflow run . -profile debug,test,docker --outdir <OUTDIR>).
  • [ ] Usage Documentation in docs/usage.md is updated.
  • [ ] Output Documentation in docs/output.md is updated.
  • [ ] CHANGELOG.md is updated.
  • [ ] README.md is updated (including new tool citations and authors/contributors).

grst avatar May 07 '24 14:05 grst

nf-core lint overall result: Passed :white_check_mark: :warning:

Posted for pipeline commit 3b05cae

+| ✅ 203 tests passed       |+
#| ❔   4 tests were ignored |#
!| ❗   4 tests had warnings |!

:heavy_exclamation_mark: Test warnings:

  • nextflow_config - Config manifest.version should end in dev: 2.7.0
  • pipeline_todos - TODO string in main.nf: Optionally add in-text citation tools to this list.
  • pipeline_todos - TODO string in main.nf: Optionally add bibliographic entries to this list.
  • pipeline_todos - TODO string in main.nf: Only uncomment below if logic in toolCitationText/toolBibliographyText has been filled!

:grey_question: Tests ignored:

:white_check_mark: Tests passed:

Run details

  • nf-core/tools version 2.14.1
  • Run at 2024-06-03 11:11:52

github-actions[bot] avatar May 07 '24 14:05 github-actions[bot]

Linting issue, but you can fix it in a separate PR, tools is getting released soon, so this won't be an issue soon

maxulysse avatar May 07 '24 14:05 maxulysse

ok, more updates are incoming anyway via #276. Can you pls merge, I don't have permissions to overrule the checks.

grst avatar May 07 '24 14:05 grst