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Improve the process requests for tools in the pipeline

Open SPPearce opened this issue 2 years ago • 0 comments

Description of feature

Samtools pileup has the config process label of process_medium, but is not parallelised at all. It requests 6 cores and 36GB of RAM by default, but doesn't need the cores. If the RAM requirement could also be decreased by default that would also be a good idea.

These are the modules that use process_medium: https://github.com/nf-core/sarek/search?q=process_medium

SPPearce avatar Aug 10 '22 09:08 SPPearce