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feat(nf-schema): remove nf-validation and update to nf-schema

Open maxulysse opened this issue 10 months ago • 3 comments

Need https://github.com/nf-core/modules/pull/5513 https://github.com/nf-core/tools/issues/2932

PR checklist

  • [ ] This comment contains a description of changes (with reason).
  • [ ] If you've fixed a bug or added code that should be tested, add tests!
  • [ ] If you've added a new tool - have you followed the pipeline conventions in the contribution docs
  • [ ] If necessary, also make a PR on the nf-core/sarek branch on the nf-core/test-datasets repository.
  • [ ] Make sure your code lints (nf-core lint).
  • [ ] Ensure the test suite passes (nf-test test tests/ --verbose --profile +docker).
  • [ ] Check for unexpected warnings in debug mode (nextflow run . -profile debug,test,docker --outdir <OUTDIR>).
  • [ ] Usage Documentation in docs/usage.md is updated.
  • [ ] Output Documentation in docs/output.md is updated.
  • [ ] CHANGELOG.md is updated.
  • [ ] README.md is updated (including new tool citations and authors/contributors).

maxulysse avatar Apr 22 '24 15:04 maxulysse

LGTM!!

Waiting for a tools release

maxulysse avatar Apr 23 '24 09:04 maxulysse

We do have some conflicts...

maxulysse avatar Aug 27 '24 09:08 maxulysse

We do have some conflicts...

one thing after another... :D

FriederikeHanssen avatar Aug 27 '24 09:08 FriederikeHanssen