sarek
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feat(nf-schema): remove nf-validation and update to nf-schema
Need https://github.com/nf-core/modules/pull/5513 https://github.com/nf-core/tools/issues/2932
PR checklist
- [ ] This comment contains a description of changes (with reason).
- [ ] If you've fixed a bug or added code that should be tested, add tests!
- [ ] If you've added a new tool - have you followed the pipeline conventions in the contribution docs
- [ ] If necessary, also make a PR on the nf-core/sarek branch on the nf-core/test-datasets repository.
- [ ] Make sure your code lints (
nf-core lint
). - [ ] Ensure the test suite passes (
nf-test test tests/ --verbose --profile +docker
). - [ ] Check for unexpected warnings in debug mode (
nextflow run . -profile debug,test,docker --outdir <OUTDIR>
). - [ ] Usage Documentation in
docs/usage.md
is updated. - [ ] Output Documentation in
docs/output.md
is updated. - [ ]
CHANGELOG.md
is updated. - [ ]
README.md
is updated (including new tool citations and authors/contributors).
LGTM!!
Waiting for a tools release
We do have some conflicts...
We do have some conflicts...
one thing after another... :D