Plot dupRadar boxplots

[ewels]

From @ewels on March 8, 2017 9:0

The current MultiQC plot for dupRadar is a little tricky to interpret.

Instead of plotting the dotted line from this plot as is done currently:

Plot the median values from this boxplot:

Needs these values extracting in the R script. Can then plot with the custom_content module if the output syntax is done properly.

Copied from original issue: SciLifeLab/NGI-RNAseq#81

[ewels]

From @Hammarn on October 16, 2017 14:50

Is this something that we want @ewels? And should we aim to have that in the next milestone?

[ewels]

Yes, if the data is easy to find.

[drpatelh]

Should probably move this issue to MultiQC GitHub @ewels?

[ewels]

dupRadar is not supported by MultiQC, as it's an R package and not a command line tool so does not have standardised outputs.

Currently this is handled entirely with custom content in the pipeline, is it not?