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fix starfusion download output for gtf to refflat

Open dodslaser opened this issue 5 months ago • 1 comments

Make output.chrgtf from STARFUSION_DOWNLOAD a tuple for compatibility with GTF_TO_REFFLAT.

This fixes reference generation when --starfusion_build is false.

PR checklist

  • [x] This comment contains a description of changes (with reason).
  • [x] Make sure your code lints (nf-core lint).
  • [x] Ensure the test suite passes (nextflow run . -profile test,docker --outdir <OUTDIR>).

dodslaser avatar Jan 27 '24 01:01 dodslaser