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Parameters for running pipeline with ArcherDx data

Open wudustan opened this issue 1 year ago • 3 comments

I have some RNA Seq fusion panel data generated with ArcherDx

Description of feature

I provide some ArcherDx fusion pipeline data here: https://drive.google.com/file/d/1Ly7WZEo732qBSobsLOVdBpzJVRRCotOn/view?usp=sharing

The specific sequencing panel is FusionPlex Pan Solid Tumor v2 18091 v1.1

Would it be possible to have some guidance on how to change the rnafusion parameters to work with this data?

It's expected for this sample to have an MN1 - PATZ1 fusion

image

wudustan avatar Jun 27 '23 13:06 wudustan