rnafusion
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Swap containers for GET_META and GET_PATH
Swap the containers for GET_META and GET_PATH to use the base ubuntu image already pulled for CAT_FASTQ, as they are already pulled by the pipeline. Helps those who struggle to download containers on a cluster.
PR checklist
- [X] This comment contains a description of changes (with reason).
- [ ] If you've fixed a bug or added code that should be tested, add tests!
- [ ] If you've added a new tool - have you followed the pipeline conventions in the contribution docs
- [ ] If necessary, also make a PR on the nf-core/rnafusion branch on the nf-core/test-datasets repository.
- [ ] Make sure your code lints (
nf-core lint
). - [ ] Ensure the test suite passes (
nextflow run . -profile test,docker --outdir <OUTDIR>
). - [ ] Usage Documentation in
docs/usage.md
is updated. - [ ] Output Documentation in
docs/output.md
is updated. - [X]
CHANGELOG.md
is updated. - [ ]
README.md
is updated (including new tool citations and authors/contributors).
@SPPearce - can you add this to the changelog
too?
@nf-core-bot fix linting
Closing this in favor of the more computationally efficient #282