publishDir pattern '*.*' in modules_alphafold2.config overmatches and causes unwanted files to be published

[jscgh]

https://github.com/nf-core/proteinfold/blob/024aeb706db57968ed8c70e903b741f91a7d017a/conf/modules_alphafold2.config#L53

The current pattern in the publishDir configuration matches all files with a dot in their name, regardless of extension or relevance. This leads to overmatching, e.g. publishing monomer directories (baseName.1/) but not multimer (baseName/).

Suggested improvement:

Use more specific patterns, such as '*.pkl', '*.pdb', '*.tsv', etc., to restrict published files to only those desired.