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verified publisher icon nf-core

UMI support in WGTS mode

Open SPPearce opened this issue 1 year ago • 1 comments

Description of feature

I have WGS data generated with a library prep that includes UMIs (Claret Biosciences SRSLY for FFPE. The current pipeline code does not allow for umis in the wgts mode, only in the targeted mode.

SPPearce avatar Jul 31 '24 08:07 SPPearce

Hi @SPPearce thanks for opening the issue. We'll have support for this functionality in an official nf-core release soon - stay tuned!

scwatts avatar Jul 31 '24 08:07 scwatts