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Assemblyscan 1.0.0
Description
This updates the assemblyscan module to v1.0.0 from v0.4.0, enabling tsv or json output.
PR checklist
- [X] This comment contains a description of changes (with reason).
- [X] If you've fixed a bug or added code that should be tested, add tests!
- [-] If you've added a new tool - have you followed the module conventions in the contribution docs
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- [X] Remove all TODO statements.
- [X] Emit the
versions.ymlfile. - [X] Follow the naming conventions.
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- [X] Follow the input/output options guidelines.
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label - [X] Use BioConda and BioContainers if possible to fulfil software requirements.
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@nf-core-bot fix linting
This looks really good, but can we add a second test to validate JSON output?