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Allow graphtyper/genotype to use compressed references
- Allows for compressed reference files
- Updates conda/docker repos
- Handles cases when outputs were not in the expected folder structure
@famosab here is a new version of the PR with a single commit.
You suddenly have 167 changed files - what happened 👀
This PR has been tagged as awaiting-changes or awaiting-feedback by an @nf-core/modules contributor. Remove stale label or add a comment if it is still useful.