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Metaspace submit

Open Bisho2122 opened this issue 9 months ago • 3 comments

PR checklist

Closes #7878 Closes #8087

  • [x] This comment contains a description of changes (with reason).
  • [ ] If you've fixed a bug or added code that should be tested, add tests!
  • [x] If you've added a new tool - have you followed the module conventions in the contribution docs
  • [ ] If necessary, include test data in your PR.
  • [x] Remove all TODO statements.
  • [x] Emit the versions.yml file.
  • [x] Follow the naming conventions.
  • [x] Follow the parameters requirements.
  • [x] Follow the input/output options guidelines.
  • [x] Add a resource label
  • [ ] Use BioConda and BioContainers if possible to fulfil software requirements.
  • Ensure that the test works with either Docker / Singularity. Conda CI tests can be quite flaky:
    • For modules:
      • [x] nf-core modules test <MODULE> --profile docker
      • [x] nf-core modules test <MODULE> --profile singularity
      • [x] nf-core modules test <MODULE> --profile conda
    • For subworkflows:
      • [ ] nf-core subworkflows test <SUBWORKFLOW> --profile docker
      • [ ] nf-core subworkflows test <SUBWORKFLOW> --profile singularity
      • [ ] nf-core subworkflows test <SUBWORKFLOW> --profile conda

Bisho2122 avatar Mar 31 '25 19:03 Bisho2122

I migrated this PR #8087 to this one.

Bisho2122 avatar Mar 31 '25 19:03 Bisho2122

My PR for a bioconda recipe was recently merged and now we have a bioconda package (https://anaconda.org/bioconda/metaspace2020). So no more linting issues :)

Bisho2122 avatar Apr 06 '25 02:04 Bisho2122

@mashehu I still need someone to approve this PR before it can be merged. It has already passed all the checks before

Bisho2122 avatar Jun 02 '25 17:06 Bisho2122