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Add fusionreport detect and download with test.
PR checklist
Closes #XXX
- [ ] This comment contains a description of changes (with reason).
- [] If you've fixed a bug or added code that should be tested, add tests!
- [x] If you've added a new tool - have you followed the module conventions in the contribution docs
- [ ] If necessary, include test data in your PR.
- [ ] Remove all TODO statements.
- [ ] Emit the
versions.ymlfile. - [x] Follow the naming conventions.
- [x] Follow the parameters requirements.
- [x] Follow the input/output options guidelines.
- [x] Add a resource
label - [x] Use BioConda and BioContainers if possible to fulfil software requirements.
- Ensure that the test works with either Docker / Singularity. Conda CI tests can be quite flaky:
- For modules:
- [x]
nf-core modules test <MODULE> --profile docker - [ ]
nf-core modules test <MODULE> --profile singularity - [ ]
nf-core modules test <MODULE> --profile conda
- [x]
- For subworkflows:
- [ ]
nf-core subworkflows test <SUBWORKFLOW> --profile docker - [ ]
nf-core subworkflows test <SUBWORKFLOW> --profile singularity - [ ]
nf-core subworkflows test <SUBWORKFLOW> --profile conda
- [ ]
- For modules:
Hi @rachwalp are you going to continue working on this PR? If not, I’d be happy to pick it up and continue the migration😊
This PR has been tagged as awaiting-changes or awaiting-feedback by an @nf-core/modules contributor. Remove stale label or add a comment if it is still useful.
Closed with https://github.com/nf-core/modules/pull/8725 and https://github.com/nf-core/modules/pull/8735