modules icon indicating copy to clipboard operation
modules copied to clipboard

update 'roary' to nf-test

Open bhargava-morampalli opened this issue 9 months ago • 1 comments

PR checklist

Closes #7678

  • [x] This comment contains a description of changes (with reason).
  • [ ] If you've fixed a bug or added code that should be tested, add tests!
  • [ ] If you've added a new tool - have you followed the module conventions in the contribution docs
  • [ ] If necessary, include test data in your PR.
  • [x] Remove all TODO statements.
  • [ ] Emit the versions.yml file.
  • [ ] Follow the naming conventions.
  • [ ] Follow the parameters requirements.
  • [ ] Follow the input/output options guidelines.
  • [ ] Add a resource label
  • [ ] Use BioConda and BioContainers if possible to fulfil software requirements.
  • Ensure that the test works with either Docker / Singularity. Conda CI tests can be quite flaky:
    • For modules:
      • [ ] nf-core modules test <MODULE> --profile docker
      • [ ] nf-core modules test <MODULE> --profile singularity
      • [ ] nf-core modules test <MODULE> --profile conda
    • For subworkflows:
      • [ ] nf-core subworkflows test <SUBWORKFLOW> --profile docker
      • [ ] nf-core subworkflows test <SUBWORKFLOW> --profile singularity
      • [ ] nf-core subworkflows test <SUBWORKFLOW> --profile conda

bhargava-morampalli avatar Mar 25 '25 05:03 bhargava-morampalli

Another space push. Don't forget to redo the snapshot, because the test names changed ;)

Redid those and pushed Can you please take a look at it again and see if this looks okay now?

bhargava-morampalli avatar Mar 25 '25 11:03 bhargava-morampalli