add module: Add xengsort/classify
Adds the xengsort tool, a tool for fast lightweight accurate xenograft sorting. This is a part 2 of two steps for xengsort, classifier.
First part is in review: https://github.com/nf-core/modules/pull/5370
PR checklist
Closes #5411
- [x] This comment contains a description of changes (with reason).
- [ ] If you've fixed a bug or added code that should be tested, add tests!
- [ ] If you've added a new tool - have you followed the module conventions in the contribution docs
- [ ] If necessary, include test data in your PR.
- [ ] Remove all TODO statements.
- [ ] Emit the
versions.ymlfile. - [ ] Follow the naming conventions.
- [ ] Follow the parameters requirements.
- [ ] Follow the input/output options guidelines.
- [ ] Add a resource
label - [ ] Use BioConda and BioContainers if possible to fulfil software requirements.
- Ensure that the test works with either Docker / Singularity. Conda CI tests can be quite flaky:
- For modules:
- [ ]
nf-core modules test <MODULE> --profile docker - [ ]
nf-core modules test <MODULE> --profile singularity - [ ]
nf-core modules test <MODULE> --profile conda
- [ ]
- For subworkflows:
- [ ]
nf-core subworkflows test <SUBWORKFLOW> --profile docker - [ ]
nf-core subworkflows test <SUBWORKFLOW> --profile singularity - [ ]
nf-core subworkflows test <SUBWORKFLOW> --profile conda
- [ ]
- For modules:
Hi @diegomscoelho , do you need some help?
@diegomscoelho , do you plan to come back to this?
https://github.com/nf-core/modules/pull/5370 has been closed :) do you have time to finalize this? @diegomscoelho
This PR has been tagged as awaiting-changes or awaiting-feedback by an @nf-core/modules contributor. Remove stale label or add a comment if it is still useful.
Closing due to inactivity :) feel free to reopen!