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draft release for LJA assembler

Open MrTomRod opened this issue 1 year ago • 0 comments

PR checklist

Closes #5178

  • [x] Added new module LJA.
  • [x] LJA works (tested Singularity and Docker) with container troder/lja
  • [x] Test works with in-house PacBio HiFi data.
  • [ ] Tested conda.
  • [ ] Replace container troder/lja with BioContainers container. Depends on https://github.com/bioconda/bioconda-recipes/issues/46572
  • [ ] Find test data or add new test data
  • [x] Remove all TODO statements.
  • [x] Emit the versions.yml file.
  • [x] Follow the naming conventions.
  • [x] Follow the parameters requirements.
  • [x] Follow the input/output options guidelines.
  • [x] Add a resource label
  • Ensure that the test works with either Docker / Singularity. Conda CI tests can be quite flaky:
    • For modules:
      • [ ] nf-core modules test <MODULE> --profile docker
      • [ ] nf-core modules test <MODULE> --profile singularity
      • [ ] nf-core modules test <MODULE> --profile conda
    • For subworkflows:
      • [x] (no subworkflows)

MrTomRod avatar Mar 24 '24 22:03 MrTomRod