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New module: cobra-meta

Open CarsonJM opened this issue 1 year ago • 1 comments

PR checklist

Closes #XXX

  • [ ] This comment contains a description of changes (with reason).
  • [ ] If you've fixed a bug or added code that should be tested, add tests!
  • [ ] If you've added a new tool - have you followed the module conventions in the contribution docs
  • [ ] If necessary, include test data in your PR.
  • [ ] Remove all TODO statements.
  • [ ] Emit the versions.yml file.
  • [ ] Follow the naming conventions.
  • [ ] Follow the parameters requirements.
  • [ ] Follow the input/output options guidelines.
  • [ ] Add a resource label
  • [ ] Use BioConda and BioContainers if possible to fulfil software requirements.
  • Ensure that the test works with either Docker / Singularity. Conda CI tests can be quite flaky:
    • For modules:
      • [ ] nf-core modules test <MODULE> --profile docker
      • [ ] nf-core modules test <MODULE> --profile singularity
      • [ ] nf-core modules test <MODULE> --profile conda
    • For subworkflows:
      • [ ] nf-core subworkflows test <SUBWORKFLOW> --profile docker
      • [ ] nf-core subworkflows test <SUBWORKFLOW> --profile singularity
      • [ ] nf-core subworkflows test <SUBWORKFLOW> --profile conda

CarsonJM avatar Mar 21 '24 15:03 CarsonJM

@maxulysse That's correct, no subcommands or other usage

@famosab Thanks for the suggestions, I'll go through and make those fixes now!

CarsonJM avatar Mar 22 '24 15:03 CarsonJM

@famosab @maxulysse Would either of you be able to take another look at this?

CarsonJM avatar Apr 02 '24 21:04 CarsonJM