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Added new module for Toulligqc

Open Salome-Brunon opened this issue 1 year ago • 1 comments

ToulligQC is a post sequencing QC tool for Oxford Nanopore sequencers. This nf-core module is quite basic but we aim to implement a few more options in the near future!

PR checklist

  • [ ] This comment contains a description of changes (with reason).
  • [ ] If you've fixed a bug or added code that should be tested, add tests!
  • [X] If you've added a new tool - have you followed the module conventions in the contribution docs
  • [ ] If necessary, include test data in your PR.
  • [X] Remove all TODO statements.
  • [X] Emit the versions.yml file.
  • [X] Follow the naming conventions.
  • [X] Follow the parameters requirements.
  • [ ] Follow the input/output options guidelines.
  • [ ] Add a resource label
  • [X] Use BioConda and BioContainers if possible to fulfil software requirements.
  • Ensure that the test works with either Docker / Singularity. Conda CI tests can be quite flaky:
    • For modules:
      • [X] nf-core modules test <MODULE> --profile docker
      • [ ] nf-core modules test <MODULE> --profile singularity
      • [ ] nf-core modules test <MODULE> --profile conda
    • For subworkflows:
      • [ ] nf-core subworkflows test <SUBWORKFLOW> --profile docker
      • [ ] nf-core subworkflows test <SUBWORKFLOW> --profile singularity
      • [ ] nf-core subworkflows test <SUBWORKFLOW> --profile conda

Salome-Brunon avatar Mar 15 '24 14:03 Salome-Brunon

@nf-core-bot fix linting

Salome-Brunon avatar Mar 15 '24 14:03 Salome-Brunon

@jfy133 Thank you for all the help! Only issue is that I don't have the rights to merge the pull request 😅 Could you do it? Thanks!

Salome-Brunon avatar Mar 28 '24 14:03 Salome-Brunon

Oh! Then please request joining the nf-core orgnisation here: https://nf-co.re/join#github and you will get merge rights :) I will merge for you!

jfy133 avatar Mar 28 '24 14:03 jfy133