Tiara is not included in bin_summary

Open maxibor opened this issue 2 years ago • 1 comments

Description of feature

Tiara results are not reported in the BIN_SUMMARY process. It would be nice to have it included to centralize the bin domain classification information. Similarly to #535 it would require adding the functionality to the bin/combine_tables.py script (ie. merging the ``tiara_summary.tsvfile produced by theTIARA_SUMMARY` process)

Nov 21 '23 11:11 maxibor

Example tiara_summary.tsv file (only the classification column would be really needed):

BinID	Prokarya	Eukarya	Organelle	Unknown	classification
MEGAHIT-MaxBin2-SZG018.001	NA	0	0	0	eukarya
MEGAHIT-MaxBin2-SZG018.002	1	3.4581592393601363e-209	3.457377783679859e-209	3.457377783679859e-209	prokarya
MEGAHIT-MaxBin2-SZG018.003	1	2.4125912832761363e-144	2.06802364667377e-144	2.067864414983475e-144	prokarya
MEGAHIT-MaxBin2-SZG018.004	1	2.116318385201147e-290	2.116318385201147e-290	2.116318385201147e-290	prokarya
MEGAHIT-MaxBin2-SZG018.005	1	2.526564404493635e-166	2.228376456618079e-175	2.2283541729649312e-175	prokarya
MEGAHIT-MaxBin2-SZG018.006	0	NA	0	0	prokarya
MEGAHIT-MaxBin2-SZG018.007	1	1.598405662291841e-104	1.5982793932322138e-104	1.5982793932322138e-104	prokarya

Nov 21 '23 12:11 maxibor