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Host removal parameter - pre-built bowtie2 index
Description of feature
Hi,
In the host removal module, the bowtie index needs to be recomputed from --host_fasta
for each execution.
Would it be possible to add --host_bt2
or similar to point to a pre-built index prefix? The logic is already implemented for the --host_genome
option, where pre-built indexes from iGenomes are used.
Thanks Simone