samplesheet is not created when --skip_fastq_download is given

[SchwarzMarek]

Description of the bug

The --skip_fastq_download flag implies that only the fastq files will not be downloaded. When using the --skip_fastq_download and --nf_core_pipeline rnaseq together, the fastq files are not downloaded (expected), but sample sheet is not created (unexpected).

Command used and terminal output

nextflow run nf-core/fetchngs -profile docker --nf_core_pipeline rnaseq --outdir test --input temp.txt --max_cpus 2 --max_memory 5.GB --skip_fastq_download

Relevant files

temp.txt

System information

N E X T F L O W ~ version 22.04.5 Launching https://github.com/nf-core/fetchngs [nostalgic_meitner] DSL2 - revision: b79cde2fb5 [master]