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Published 20 hours ago • verified publisher icon nf-core

DSL2: metagenomics

Open jfy133 opened this issue 1 year ago • 6 comments

  • BBDUK
  • HOSTREMOVAL
  • MALT/KRAKEN
  • MALTEXTRACT
  • KRAKENPARSE

New

  • Option: mapped OR unmapped reads to metagenomic screeming
  • KRAKENUNIQ
  • METAPHLAN3
  • PRINSEQ (alternative complexity filterer)

jfy133 avatar Oct 07 '22 07:10 jfy133