nf-core
Add batching in mgikit
Description of feature
Hello everyone, I am a newbie and I would like to integrate the demultiplexing process for MGI sequencing data using mgikit in the pipeline. I have set it up for my own data already and found out that it needed batching for large number of samples, so maybe fqtk would have been a better option from the start. Anyway, I would like to try to learn many things along the way.
Not yet in a released version, but AFAICS it's already in dev: https://github.com/nf-core/demultiplex/pull/299
Leaving this open because there are comments from @UtaHar about the need for batching when many samples are included (see #348).
Voting for next release, hopefully faster than the 1.7.0 - this could become part of 1.7.1 then? Can you try the current impementation already?
